Publications, Patents and PhD Thesis

Publications, Patents and PhD Thesis



Dorkeld, F., Streiff, R., Sauné, L., Castel, G., Ogliastro, M., Kerdelhué, C. 2023. Sequence, assembly and count datasets of viruses associated to the pine processionary moth Thaumetopoea pityocampa (Denis & Schiffermüller) (Lepidoptera, Notodontidae) identified from transcriptomic high-throughput sequencing. Data in Brief, 48, 109180. DOI : 10.1016/j.dib.2023.109180.

Fristot, E., Bessede, T., Camacho Rufino, M., Mayonove, P., Chang, H.J., Zuniga, A., Michon, A.L., Godreuil, S., Bonnet, J., Cambray, G. 2023. An optimized electrotransformation protocol for Lactobacillus jensenii. PLos One, 18, e0280935. DOI : 10.1371/journal.pone.0280935.

Fuandila, N.N., Lusiastuti, A.M., Yuhana, M., Santika, A., Gosselin-Grenet, A.-S., Cherif, E., Avarre, J.-C. 2023. Prevalence of Cyprinid herpesvirus 3 and ORF150 genomic variations in carp populations of Indonesia. Bulletin of the European Association of Fish Pathologists, 101-112. DOI : 10.48045/001c.84009.

Ghousein, A., Tutagata, J., Schrieke, H., Etienne, M., Chaumeau, V., Boyer, S., Pages, N., Roiz, D., Eren, A.M., Cambray, G., Reveillaud, J. 2023. pWCP is a widely distributed and highly conserved Wolbachia plasmid in Culex pipiens and Culex quinquefasciatus mosquitoes worldwide. ISME Communications, 3, 40. DOI : 10.1038/s43705-023-00248-2.


Deshayes, C., Gosselin-Grenet, A.S., Ogliastro, M., Lapied, B., Apaire-Marchais, V. 2022. Can virus-like particles be used as synergistic agent in pest management ? Viruses, 14. DOI : 10.3390/v14050943.

Fuandila, N.N., Gosselin-Grenet, A.-S., Tilak, M.-K., Bergmann, S.M., Escoubas, J.-M., Klafack, S., Lusiastuti, A.M., Yuhana, M., Fiston-Lavier, A.-S., Avarre, J.-C., Cherif, E. 2022. Structural variation turnovers and defective genomes: key drivers for the in vitro evolution of the large double-stranded DNA koi herpesvirus (KHV). Peer Community Journal, 2. DOI : 10.24072/pcjournal.154.

Horard, B., Terretaz, K., Gosselin-Grenet, A.-S., Sobry, H., Sicard, M., Landmann, F., Loppin, B. 2022. Paternal transmission of the Wolbachia CidB toxin underlies cytoplasmic incompatibility. Current Biology, 32, 1-13. DOI : 10.1016/j.cub.2022.01.052.

Moubset, O.,  François, S., Maclot, F., Palanga, E., Julian, C., Claude, L., Fernandez, E., Rott, P., Daugrois, J.-H., Antoine-Lorquin, A., Bernardo, P., Blouin, A.G., Temple, C., Kraberger, S., Fontenele, R.S., Harkins, G.W., Ma, Y., Marais, A., Candresse, T., Chéhida, S.B., Lefeuvre, P., Lett, J.-M., Varsani, A., Massart, S., Ogliastro, M., Martin, D. P., Filloux, D., Roumagnac, P. 2022. Virion-associated nucleic acid-based metagenomics: A decade of advances in molecular characterization of plant viruses. Phytopathology, 112, 2253-2272. DOI : 10.1094/phyto-03-22-0096-rvw.

Wagemans, J., Holtappels, D., Vainio, E., Rabiey, M., Marzachì, C., Herrero, S., Ravanbakhsh, M., Tebbe, C.C., Ogliastro, M., Ayllón, M.A., Turina, M. 2022. Going viral: Virus-based biological control agents for plant protection. Annual Review of PhytopathologyDOI : 10.1146/annurev-phyto-021621-114208.


Dorkeld, F., Streiff, R., Kerdelhué, C., Ogliastro, M. 2021. Coding-complete genome sequence of a Partitivirus isolated from pine processionary moth eggs. Microbiology Resource Announcements, 10, e00071-00021. DOI : 10.1128/MRA.00071-21.

Dorkeld, F., Streiff, R., Kerdelhué, C., Ogliastro, M. 2021. Coding-complete genome sequences of an iteradensovirus and an alphapermutotetra-like virus identified from the pine processionary moth (Thaumetopoea pityocampa) in Portugal. Microbiology Resource Announcements, 10. DOI : 10.1128/MRA.01163-20.

François, S., Antoine-Lorquin, A., Kulikowski, M., Frayssinet, M., Filloux, D., Fernandez, E. et al. 2021. Characterisation of the viral community associated with the Alfalfa weevil (Hypera postica) and its host plant, Alfalfa (Medicago sativa). Viruses, 13, 791. DOI : 10.3390/v13050791.

Gosselin-Grenet, A.-S., de Almeida, R.S., Roumagnac, P., Ayouba, A., Simonin, Y., Nisole, S. 2021. Virus et chercheurs sous le soleil de Montpellier. Virologie, 25, 3-5. DOI : 10.1684/vir.2021.0885.

Labadie, T., Garcia, D., Mutuel, D., Ogliastro, M., Cambray, G., Parrish, C.R. 2021. Capsid proteins are necessary for replication of a Parvovirus. Journal of Virology, 95, e00523-00521. DOI : 10.1128/JVI.00523-21.


Perrin, A., Gosselin-Grenet, A.-S., Rossignol, M., Ginibre, C., Scheid, B., Lagneau, C., Chandre, F., Baldet, T., Ogliastro, M.-H., Bouyer, J. 2020. Variation in the susceptibility of urban Aedes mosquitoes infected with a densovirus. Scientific Reports, 10, 18654. DOI : 10.1038/s41598-020-75765-4


Altinli, M., Lequime, S., Courcelle, M., Francois, S., Justy, F., Gosselin-Grenet, A.-S., Ogliastro, M.-H., Weill, M., Sicard, M. 2019. Evolution and phylogeography of Culex pipiens densovirus. Virus Evolution 5, vez053. DOI : 10.1093/ve/vez053.

Cotmore, S. F., Agbandje-McKenna, M., Canuti, M., Chiorini, J. A., Eis-Hubinger, A.-M., Hughes, J., Mietzsch, M., Modha, S., Ogliastro, M.-H., Pénzes, J. J., Pintel, D. J., Qiu, J., Soderlund-Venermo, M., Tattersall, P., Tijssen, P. 2019. ICTV Virus Taxonomy Profile: Parvoviridae. Journal of General Virology, 2 p. DOI : 10.1099/jgv.0.001212.

François, S., Mutuel, D., Duncan, A. B., Rodrigues, L. R., Danzelle, C., Lefevre, S., Santos, I., Frayssinet, M., Fernandez, E., Filloux, D., Roumagnac, P., Froissart, R., Ogliastro, M.-H. 2019. A new prevalent densovirus discovered in Acari. Insight from metagenomics in viral communities associated with two-spotted mite (Tetranychus urticae) populations. Viruses, 11 (3), 233. DOI : 10.3390/v11030233.

Klafack, S., Fiston-Lavier, A.-S., Bergmann, S., Hammoumi, S., Schröder, L., Fuchs, W., Lusiastuti, A., Lee, P.-Y., Heredia, S. V., Master Student Consortium, Gosselin-Grenet, A.-S., Avarre, J.-C. 2019. Cyprinid herpesvirus 3 evolves in vitro through an assemblage of haplotypes that alternatively become dominant or under-represented. Viruses, 11 (8), 12 p. DOI : 10.3390/v11080754.

Lorenzi, A., Ravallec, M., Eychenne, M., Jouan, V., Robin, S., Darboux, I., Legeai, F., Gosselin-Grenet, A.S., Sicard, M., Stoltz, D., Volkoff, A.N. 2019. RNA interference identifies domesticated viral genes involved in assembly and trafficking of virus-derived particles in ichneumonid wasps. PLoS Pathogens, 15 (12), e1008210. DOI : 10.1371/journal.ppat.1008210.

Pigeyre, L., Schatz, M., Ravallec, M., Gasmi, L., Negre, N., Clouet, C., Seveno, M., El Koulali, K., Decourcelle, M., Guerardel, Y., Cot, D., Dupressoir, T., Gosselin-Grenet, A.-S., Ogliastro, M.-H. 2019. Interaction of a densovirus with glycans of the peritrophic matrix mediates oral infection of the Lepidopteran pest Spodoptera frugiperdaViruses, 11 (9), 21 p. DOI : 10.3390/v11090870.


Altinli, M., Soms, J., Ravallec, M., Justy, F., Bonneau, M., Weill, M., Gosselin-Grenet, A.-S., Sicard, M. 2018. Sharing cells with Wolbachia: the transovarian vertical transmission of Culex pipiens densovirus. Environmental Microbiology, 21 (9), 3284-3298. DOI : 10.1111/1462-2920.14511.

Cambray, G., Guimarães, J., Arkin, A. P. 2018. Evaluation of 244,000 synthetic sequences reveals design principles to optimize translation in Escherichia coliNature Biotechnology, 36 (10), 20 p. DOI : 10.1038/nbt.4238.

Escudero, J. A., Nivina, A., Cambray, G., López-Igual, R., Loot, C., Mazel, D. 2018. Recoding of synonymous genes to expand evolutionary landscapes requires control of secondary structure affecting translation. Biotechnology and Bioengineering, 115 (1), 184-191. DOI : 10.1002/bit.26450.

Francois, S., Filloux, D., Frayssinet, M., Roumagnac, P., Martin, D. P., Ogliastro, M.-H., Froissart, R. 2018. Increase in taxonomic assignment efficiency of viral reads in metagenomic studies. Virus Research, 244, 230-234. DOI : 10.1016/j.virusres.2017.11.011.

François, S., Filloux, D., Fernandez, E., Ogliastro, M.-H., Roumagnac, P. 2018. Viral metagenomics approaches for high-resolution screening of multiplexed arthropod and plant viral communities. Methods in Molecular Biology, 1746, 77-95. DOI : 10.1007/978-1-4939-7683-6_7.

Gasmi, L., Jakubowska, A. K., Ferré, J.,  Ogliastro, M.-H., Herrero, S. 2018. Characterization of two groups of Spodoptera exigua Hübner (Lepidoptera: Noctuidae) C-type lectins and insights into their role in defense against the densovirus JcDV. Archives of Insect Biochemistry and Physiology, 97 (1), 12 p. DOI : 10.1002/arch.21432.

Gasmi, L., Frattini, A., Ogliastro, M.-H., Herrero, S. 2018. Outcome of mixed DNA-virus infections on Spodoptera exigua Hubner (Noctuidae, Lepidoptera) susceptibility to SeMNPV. Journal of Pest Science, 92 (2), 885–893. DOI : 10.1007/s10340-018-01067-4.

Nemchinov, L. G., François, S., Roumagnac, P., Ogliastro, M.-H., Hammond, R. W., Mollov, D. S., Filloux, D. 2018. Characterization of alfalfa virus F, a new member of the genus Marafivirus. PLoS One, 13 (9). DOI : 10.1371/journal.pone.0203477.

Rizk, F., Laverdure, S., D'Alençon, E., Bossin, H., Dupressoir, T. 2018. Linear Lepidopteran ambidensovirus 1 sequences drive random integration of a reporter gene in transfected Spodoptera frugiperda cells. PeerJ, 6, 23 p. DOI : 10.7717/peerj.4860.


Cardinale, S., Cambray, G. 2017. Genome-wide analysis of E. coli cell-gene interactions. BMC Systems Biology, 11 (1), 112. DOI : 10.1186/s12918-017-0494-1.

Gouin, A., Bretaudeau, A., Nam, K., Gimenez, S., Aury, J.-M., Duvic, B., Hilliou, F., Durand, N., Montagné, N., Darboux, I., Kuwar, S., Chertemps, T., Siaussat, D., Bretschneider, A., Moné, Y., Ahn, S.-J., Hänniger, S., Gosselin-Grenet, A.-S., Neunemann, D., Maumus, F., Luyten, I., Labadie, K., Xu, W., Koutroumpa, F., Escoubas, J.-M., Llopis, A., Maïbèche-Coisne, M., Salasc, F., Tomar, A., Anderson, A. R., Khan, S. A., Dumas, P., Orsucci, M., Guy, J., Belser, C., Alberti, A., Noel, B., Couloux, A., Mercier, J., Nidelet, S., Dubois, E., Liu, N.-Y., Boulogne, I., Mirabeau, O., Le Goff, G., Gordon, K., Oakeshott, J., Consoli, F. L., Volkoff, A.-N., Fescemyer, H. W., Marden, J. H., Luthe, D. S., Herrero, S., Heckel, D. G., Wincker, P., Kergoat, G. J., Amselem, J., Quesneville, H., Groot, A. T., Jacquin-Joly, E., Nègre, N., Lemaitre, C., Legeai, F., D'Alençon, E., Fournier, P. 2017. Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges. Scientific Reports, 7 (1), 11816. DOI : 10.1038/s41598-017-10461-4.

Streito, J. C., Clouet, C., Hamdi, F., Gauthier, N. 2017. Population genetic structure of the biological control agent Macrolophus pygmaeus in Mediterranean agroecosystems. Insect Sciences 24, 859-876. DOI : 10.1111/1744-7917.12370.


Apaire-Marchais, V., Ogliastro, M.-H., Chandre, F., Pennetier, C., Raymond, V., Lapied, B. 2016. Virus and calcium: an unexpected tandem to optimize insecticide efficacy. Environmental Microbiology Reports, 8 (2), 168-178. DOI : 10.1111/1758-2229.12377.

Bernardo, P., Muhire, B., François, S., Deshoux, M., Hartnady, P., Farkas, K., Kraberger, S., Filloux, D., Fernandez, E., Galzi, S., Ferdinand, R., Granier, M., Marais, A., Monge Blasco, P., Candresse, T., Escriu, F., Varsani, A., Harkins, G. W., Martin, D. P., Roumagnac, P. 2016. Molecular characterization and prevalence of two capulaviruses: Alfalfa leaf curl virus from France and Euphorbia caput-medusae latent virus from South Africa. Virology, 493, 142-153. DOI : 10.1016/j.virol.2016.03.016.

Cambray, G., Guimaraes, J. C., Mutalik, V. K., Lam, C., Mai, Q. A., Thimmaiah, T., Carothers, J. M., Arkin, A. P., Endy, D., 2016. Measurement and modeling of intrinsic transcription terminators. Nucleic Acids Research, 44, 7006. DOI : 10.1093/nar/gkw379.

François, S., Filloux, D., Roumagnac, P., Bigot, D., Gayral, P., Martin, D., Froissart, R., Ogliastro, M.-H. 2016. Discovery of parvovirus-related sequences in an unexpected broad range of animals. Scientific Reports, 6, 30880. DOI : 10.1038/srep30880.

Salasc, F., Mutuel, D., Debaisieux, S., Perrin, A., Dupressoir, T., Gosselin-Grenet, A.-S., Ogliastro, M.-H. 2016. Role of the phosphatidylinositol-3-kinase/Akt/target of rapamycin pathway during ambidensovirus infection of insect cells. Journal of General Virology, 97 (1), 233-245. DOI : 10.1099/jgv.0.000327.


Gosselin Grenet, A.-S., Salasc, F., François, S., Mutuel, D., Dupressoir, T., Multeau, C., Perrin, A., Ogliastro, M.-H. 2015. Les densovirus : une « massive attaque » chez les arthropodes. Virologie, 19 (1), 19-31. DOI : 10.1684/vir.2015.0589.

Laarif, A., Saleh, D., Clouet, C., Gauthier, N. 2015. Regional co-occurrence between distinct Bemisia tabaci (Hemiptera: Aleyrodidae) species in Tunisia with new insights into the role of host plants. Phytoparasitica, 43, 135-150.


François, S., Bernardo, P., Filloux, D., Roumagnac, P., Yaverkovski, N., Froissart, R., Ogliastro, M.-H. 2014. A novel itera-like densovirus isolated by viral metagenomics from the sea barley Hordeum marinumGenome Announcements, 2 (6). DOI : 10.1128/genomeA.01196-14 .

Gauthier, N., Clouet, C., Perrakis, A., Kapantaidaki, D., Peterschmitt, M., Tsagkarakou, A., 2014. Genetic structure of Bemisia tabaci Med populations from home-range countries, inferred by nuclear and cytoplasmic markers: impact on the distribution of the insecticide resistance genes. Pest Management Science, 70, 1477-1491. DOI : 10.1002/ps.3733.

Guimaraes, J. C., Rocha, M., Arkin, A. P., Cambray, G. 2014. D-Tailor: automated analysis and design of DNA sequences. Bioinformatics, 30, 1087-1094. DOI : 10.1093/bioinformatics/btt742.

Legeai, F., Gimenez, S., Duvic, B., Escoubas, J.-M., Gosselin-Grenet, A.-S., Blanc, F., Cousserans, F., Seninet, I., Bretaudeau, A., Mutel, D., Girard, P.-A., Monsempes, C., Magdelenat, G., Hilliou, F., Feyereisen, R., Ogliastro, M.-H., Volkoff, A.-N., Jacquin-Joly, E., D'Alençon, E., Negre, N., Fournier, P. 2014. Establishment and analysis of a reference transcriptome for Spodoptera frugiperdaBMC Genomics, 15, 704. DOI : 10.1186/1471-2164-15-704.

Vayssier Taussat, M., Albina, E., Citti, C., Cosson, J.-F., Jacques, M. A., Lebrun, M.-H., Le Loir, Y., Ogliastro, M.-H., Petit, M.-A., Roumagniac, P., Candresse, T. 2014. Shifting the paradigm from pathogens to pathobiome: new concepts in the light of meta-omics. Frontiers in Cellular and Infection Microbiology, 4, 29. DOI : 10.3389/fcimb.2014.00029.


Wang, Y., Castelli, I., Gosselin-Grenet, A.-S., Cermenati, G., Ravallec, M., Fiandra, L., Debaisieux, S., Multeau, C., Lautredou, N., Dupressoir, T., Li, Y., Casartelli, M., Ogliastro, M. 2013. Densovirus crosses the insect midgut by transcytosis and disturbs the barrier epithelial function. Journal of Virology, 87 (22), 12380-12391. DOI : 2013 10.1128/JVI.01396-13.


Multeau, C., Froissart, R., Perrin, A., Castelli, I. Casartelli, M., Ogliastro, M. 2012. Four amino acids on the capsid of the densovirus determine the lepidopteran host midgut recognition.  Journal of Virology, 86, 5937-5941. DOI : 2012. 10.1128/JVI.06839-11.


Mutuel, D., Ravallec, M., Chabi, B., Multeau, C., Salmon, J.-M., Fournier, P., Ogliastro, M. 2010. Pathogenesis of Junonia coenia densovirus in Spodoptera frugiperda : A route of infection that leads to hypoxia. Virology, 403, 137-144. DOI : 10.1016/j.virol.2010.04.003.


Vendeville, A., Ravallec, M., Jousset, F. X., Devise, M., Mutuel, D., López-Ferber, M., Fournier, P., Dupressoir, T., Ogliastro, M.. Densovirus infectious pathway requires clathrin-mediated endocytosis followed by trafficking to the nucleus. 2009. Journal of Virology, 83 (9), 4678-89.


Perrin, A., Cousserans, F., Bergoin, M., Fournier, P., Ogliastro, M. 2010. Vecteurs dérivés de densovirus pour le transfert de gènes chez l’insecte. Brevet n° FR 1004292.

PhD Thesis

Nurul Novelia FUANDILA. 2023. Role of structural variations in the genetic diversity and evolution of the large dsDNA Cyprinid herpesvirus 3. Thèse de doctorat Systèmes intégrés, environnement et biodiversité, Montpellier, France, sous la direction de Jean-Christophe AVARRE et Anne-Sophie GOSSELIN-GRENET.

Laetitia PIGEYRE. 2019. Franchissement de la barrière intestinale du lépidoptère Spodoptera frugiperda par le densovirus JcDV. EPHE : Thèse de doctorat Systèmes intégrés, environnement et biodiversité, Montpellier, France, sous la direction de Anne-Sophie GOSSELIN et Thierry DUPRESSOIR.

Sarah FRANÇOIS. 2017. Diversité et écologie des virus associés aux arthropodes : des communautés aux génomes. Thèse de doctorat de l'Université de Montpellier, Montpellier, France, sous la direction de Mylène OGLIASTRO & Rémy FROISSART. Disponible sur

Fanny SALASC. 2014. Infection par un parvovirus d'insecte et voie de signalisation cellulaire PI3K/Akt/TOR : rôle dans la multiplication virale. EPHE : Thèse de doctorat Systèmes intégrés, environnement et biodiversité, Montpellier, France, sous la direction de Thierry DUPRESSOIR

Cécilia MULTEAU. 2012. Contribution à l'étude du potentiel d'utilisation des Densovirus en lutte microbiologique. Thèse de doctorat en Virologie de l'Université Montpellier 2, Montpellier, France sous la direction de Mylène OGLIASTRO.


Modification date: 28 March 2024 | Publication date: 10 December 2011 | By: M. Ogliastro, I. Seninet