Publications
2023
Dorkeld, F., Streiff, R., Sauné, L., Castel, G., Ogliastro, M., Kerdelhué, C. 2023. Sequence, assembly and count datasets of viruses associated to the pine processionary moth Thaumetopoea pityocampa (Denis & Schiffermüller) (Lepidoptera, Notodontidae) identified from transcriptomic high-throughput sequencing. Data in Brief, 48, 109180. DOI : 10.1016/j.dib.2023.109180.
Fristot, E., Bessede, T., Camacho Rufino, M., Mayonove, P., Chang, H.J., Zuniga, A., Michon, A.L., Godreuil, S., Bonnet, J., Cambray, G. 2023. An optimized electrotransformation protocol for Lactobacillus jensenii. PLos One, 18, e0280935. DOI : 10.1371/journal.pone.0280935.
Fuandila, N.N., Lusiastuti, A.M., Yuhana, M., Santika, A., Gosselin-Grenet, A.-S., Cherif, E., Avarre, J.-C. 2023. Prevalence of Cyprinid herpesvirus 3 and ORF150 genomic variations in carp populations of Indonesia. Bulletin of the European Association of Fish Pathologists, 101-112. DOI : 10.48045/001c.84009.
Ghousein, A., Tutagata, J., Schrieke, H., Etienne, M., Chaumeau, V., Boyer, S., Pages, N., Roiz, D., Eren, A.M., Cambray, G., Reveillaud, J. 2023. pWCP is a widely distributed and highly conserved Wolbachia plasmid in Culex pipiens and Culex quinquefasciatus mosquitoes worldwide. ISME Communications, 3, 40. DOI : 10.1038/s43705-023-00248-2.
2022
Deshayes, C., Gosselin-Grenet, A.S., Ogliastro, M., Lapied, B., Apaire-Marchais, V. 2022. Can virus-like particles be used as synergistic agent in pest management ? Viruses, 14. DOI : 10.3390/v14050943.
Fuandila, N.N., Gosselin-Grenet, A.-S., Tilak, M.-K., Bergmann, S.M., Escoubas, J.-M., Klafack, S., Lusiastuti, A.M., Yuhana, M., Fiston-Lavier, A.-S., Avarre, J.-C., Cherif, E. 2022. Structural variation turnovers and defective genomes: key drivers for the in vitro evolution of the large double-stranded DNA koi herpesvirus (KHV). Peer Community Journal, 2. DOI : 10.24072/pcjournal.154.
Horard, B., Terretaz, K., Gosselin-Grenet, A.-S., Sobry, H., Sicard, M., Landmann, F., Loppin, B. 2022. Paternal transmission of the Wolbachia CidB toxin underlies cytoplasmic incompatibility. Current Biology, 32, 1-13. DOI : 10.1016/j.cub.2022.01.052.
Moubset, O., François, S., Maclot, F., Palanga, E., Julian, C., Claude, L., Fernandez, E., Rott, P., Daugrois, J.-H., Antoine-Lorquin, A., Bernardo, P., Blouin, A.G., Temple, C., Kraberger, S., Fontenele, R.S., Harkins, G.W., Ma, Y., Marais, A., Candresse, T., Chéhida, S.B., Lefeuvre, P., Lett, J.-M., Varsani, A., Massart, S., Ogliastro, M., Martin, D. P., Filloux, D., Roumagnac, P. 2022. Virion-associated nucleic acid-based metagenomics: A decade of advances in molecular characterization of plant viruses. Phytopathology, 112, 2253-2272. DOI : 10.1094/phyto-03-22-0096-rvw.
Wagemans, J., Holtappels, D., Vainio, E., Rabiey, M., Marzachì, C., Herrero, S., Ravanbakhsh, M., Tebbe, C.C., Ogliastro, M., Ayllón, M.A., Turina, M. 2022. Going viral: Virus-based biological control agents for plant protection. Annual Review of Phytopathology. DOI : 10.1146/annurev-phyto-021621-114208.
2021
Dorkeld, F., Streiff, R., Kerdelhué, C., Ogliastro, M. 2021. Coding-complete genome sequence of a Partitivirus isolated from pine processionary moth eggs. Microbiology Resource Announcements, 10, e00071-00021. DOI : 10.1128/MRA.00071-21.
Dorkeld, F., Streiff, R., Kerdelhué, C., Ogliastro, M. 2021. Coding-complete genome sequences of an iteradensovirus and an alphapermutotetra-like virus identified from the pine processionary moth (Thaumetopoea pityocampa) in Portugal. Microbiology Resource Announcements, 10. DOI : 10.1128/MRA.01163-20.
François, S., Antoine-Lorquin, A., Kulikowski, M., Frayssinet, M., Filloux, D., Fernandez, E. et al. 2021. Characterisation of the viral community associated with the Alfalfa weevil (Hypera postica) and its host plant, Alfalfa (Medicago sativa). Viruses, 13, 791. DOI : 10.3390/v13050791.
Gosselin-Grenet, A.-S., de Almeida, R.S., Roumagnac, P., Ayouba, A., Simonin, Y., Nisole, S. 2021. Virus et chercheurs sous le soleil de Montpellier. Virologie, 25, 3-5. DOI : 10.1684/vir.2021.0885.
Labadie, T., Garcia, D., Mutuel, D., Ogliastro, M., Cambray, G., Parrish, C.R. 2021. Capsid proteins are necessary for replication of a Parvovirus. Journal of Virology, 95, e00523-00521. DOI : 10.1128/JVI.00523-21.
2020
Perrin, A., Gosselin-Grenet, A.-S., Rossignol, M., Ginibre, C., Scheid, B., Lagneau, C., Chandre, F., Baldet, T., Ogliastro, M.-H., Bouyer, J. 2020. Variation in the susceptibility of urban Aedes mosquitoes infected with a densovirus. Scientific Reports, 10, 18654. DOI : 10.1038/s41598-020-75765-4. https://hal.umontpellier.fr/DGIMI/hal-02985676v1.
2019
Altinli, M., Lequime, S., Courcelle, M., Francois, S., Justy, F., Gosselin-Grenet, A.-S., Ogliastro, M.-H., Weill, M., Sicard, M. 2019. Evolution and phylogeography of Culex pipiens densovirus. Virus Evolution 5, vez053. DOI : 10.1093/ve/vez053.
Cotmore, S. F., Agbandje-McKenna, M., Canuti, M., Chiorini, J. A., Eis-Hubinger, A.-M., Hughes, J., Mietzsch, M., Modha, S., Ogliastro, M.-H., Pénzes, J. J., Pintel, D. J., Qiu, J., Soderlund-Venermo, M., Tattersall, P., Tijssen, P. 2019. ICTV Virus Taxonomy Profile: Parvoviridae. Journal of General Virology, 2 p. DOI : 10.1099/jgv.0.001212. http://prodinra.inra.fr/record/462794
François, S., Mutuel, D., Duncan, A. B., Rodrigues, L. R., Danzelle, C., Lefevre, S., Santos, I., Frayssinet, M., Fernandez, E., Filloux, D., Roumagnac, P., Froissart, R., Ogliastro, M.-H. 2019. A new prevalent densovirus discovered in Acari. Insight from metagenomics in viral communities associated with two-spotted mite (Tetranychus urticae) populations. Viruses, 11 (3), 233. DOI : 10.3390/v11030233. http://prodinra.inra.fr/record/464797
Klafack, S., Fiston-Lavier, A.-S., Bergmann, S., Hammoumi, S., Schröder, L., Fuchs, W., Lusiastuti, A., Lee, P.-Y., Heredia, S. V., Master Student Consortium, Gosselin-Grenet, A.-S., Avarre, J.-C. 2019. Cyprinid herpesvirus 3 evolves in vitro through an assemblage of haplotypes that alternatively become dominant or under-represented. Viruses, 11 (8), 12 p. DOI : 10.3390/v11080754. http://prodinra.inra.fr/record/486282
Lorenzi, A., Ravallec, M., Eychenne, M., Jouan, V., Robin, S., Darboux, I., Legeai, F., Gosselin-Grenet, A.S., Sicard, M., Stoltz, D., Volkoff, A.N. 2019. RNA interference identifies domesticated viral genes involved in assembly and trafficking of virus-derived particles in ichneumonid wasps. PLoS Pathogens, 15 (12), e1008210. DOI : 10.1371/journal.ppat.1008210. https://hal.inrae.fr/hal-02483831
Pigeyre, L., Schatz, M., Ravallec, M., Gasmi, L., Negre, N., Clouet, C., Seveno, M., El Koulali, K., Decourcelle, M., Guerardel, Y., Cot, D., Dupressoir, T., Gosselin-Grenet, A.-S., Ogliastro, M.-H. 2019. Interaction of a densovirus with glycans of the peritrophic matrix mediates oral infection of the Lepidopteran pest Spodoptera frugiperda. Viruses, 11 (9), 21 p. DOI : 10.3390/v11090870. http://prodinra.inra.fr/record/486352
2018
Altinli, M., Soms, J., Ravallec, M., Justy, F., Bonneau, M., Weill, M., Gosselin-Grenet, A.-S., Sicard, M. 2018. Sharing cells with Wolbachia: the transovarian vertical transmission of Culex pipiens densovirus. Environmental Microbiology, 21 (9), 3284-3298. DOI : 10.1111/1462-2920.14511. http://prodinra.inra.fr/record/486278
Cambray, G., Guimarães, J., Arkin, A. P. 2018. Evaluation of 244,000 synthetic sequences reveals design principles to optimize translation in Escherichia coli. Nature Biotechnology, 36 (10), 20 p. DOI : 10.1038/nbt.4238. http://prodinra.inra.fr/record/442213
Escudero, J. A., Nivina, A., Cambray, G., López-Igual, R., Loot, C., Mazel, D. 2018. Recoding of synonymous genes to expand evolutionary landscapes requires control of secondary structure affecting translation. Biotechnology and Bioengineering, 115 (1), 184-191. DOI : 10.1002/bit.26450. http://prodinra.inra.fr/record/433115
Francois, S., Filloux, D., Frayssinet, M., Roumagnac, P., Martin, D. P., Ogliastro, M.-H., Froissart, R. 2018. Increase in taxonomic assignment efficiency of viral reads in metagenomic studies. Virus Research, 244, 230-234. DOI : 10.1016/j.virusres.2017.11.011. http://prodinra.inra.fr/record/423753
François, S., Filloux, D., Fernandez, E., Ogliastro, M.-H., Roumagnac, P. 2018. Viral metagenomics approaches for high-resolution screening of multiplexed arthropod and plant viral communities. Methods in Molecular Biology, 1746, 77-95. DOI : 10.1007/978-1-4939-7683-6_7. http://prodinra.inra.fr/record/459145
Gasmi, L., Jakubowska, A. K., Ferré, J., Ogliastro, M.-H., Herrero, S. 2018. Characterization of two groups of Spodoptera exigua Hübner (Lepidoptera: Noctuidae) C-type lectins and insights into their role in defense against the densovirus JcDV. Archives of Insect Biochemistry and Physiology, 97 (1), 12 p. DOI : 10.1002/arch.21432. http://prodinra.inra.fr/record/417607
Gasmi, L., Frattini, A., Ogliastro, M.-H., Herrero, S. 2018. Outcome of mixed DNA-virus infections on Spodoptera exigua Hubner (Noctuidae, Lepidoptera) susceptibility to SeMNPV. Journal of Pest Science, 92 (2), 885–893. DOI : 10.1007/s10340-018-01067-4.
Nemchinov, L. G., François, S., Roumagnac, P., Ogliastro, M.-H., Hammond, R. W., Mollov, D. S., Filloux, D. 2018. Characterization of alfalfa virus F, a new member of the genus Marafivirus. PLoS One, 13 (9). DOI : 10.1371/journal.pone.0203477. http://prodinra.inra.fr/record/447094
Rizk, F., Laverdure, S., D'Alençon, E., Bossin, H., Dupressoir, T. 2018. Linear Lepidopteran ambidensovirus 1 sequences drive random integration of a reporter gene in transfected Spodoptera frugiperda cells. PeerJ, 6, 23 p. DOI : 10.7717/peerj.4860. http://prodinra.inra.fr/record/433581
2017
Cardinale, S., Cambray, G. 2017. Genome-wide analysis of E. coli cell-gene interactions. BMC Systems Biology, 11 (1), 112. DOI : 10.1186/s12918-017-0494-1. http://prodinra.inra.fr/record/418721
Gouin, A., Bretaudeau, A., Nam, K., Gimenez, S., Aury, J.-M., Duvic, B., Hilliou, F., Durand, N., Montagné, N., Darboux, I., Kuwar, S., Chertemps, T., Siaussat, D., Bretschneider, A., Moné, Y., Ahn, S.-J., Hänniger, S., Gosselin-Grenet, A.-S., Neunemann, D., Maumus, F., Luyten, I., Labadie, K., Xu, W., Koutroumpa, F., Escoubas, J.-M., Llopis, A., Maïbèche-Coisne, M., Salasc, F., Tomar, A., Anderson, A. R., Khan, S. A., Dumas, P., Orsucci, M., Guy, J., Belser, C., Alberti, A., Noel, B., Couloux, A., Mercier, J., Nidelet, S., Dubois, E., Liu, N.-Y., Boulogne, I., Mirabeau, O., Le Goff, G., Gordon, K., Oakeshott, J., Consoli, F. L., Volkoff, A.-N., Fescemyer, H. W., Marden, J. H., Luthe, D. S., Herrero, S., Heckel, D. G., Wincker, P., Kergoat, G. J., Amselem, J., Quesneville, H., Groot, A. T., Jacquin-Joly, E., Nègre, N., Lemaitre, C., Legeai, F., D'Alençon, E., Fournier, P. 2017. Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges. Scientific Reports, 7 (1), 11816. DOI : 10.1038/s41598-017-10461-4. http://prodinra.inra.fr/record/411711
Streito, J. C., Clouet, C., Hamdi, F., Gauthier, N. 2017. Population genetic structure of the biological control agent Macrolophus pygmaeus in Mediterranean agroecosystems. Insect Sciences 24, 859-876. DOI : 10.1111/1744-7917.12370.
2016
Apaire-Marchais, V., Ogliastro, M.-H., Chandre, F., Pennetier, C., Raymond, V., Lapied, B. 2016. Virus and calcium: an unexpected tandem to optimize insecticide efficacy. Environmental Microbiology Reports, 8 (2), 168-178. DOI : 10.1111/1758-2229.12377. http://prodinra.inra.fr/record/352308
Bernardo, P., Muhire, B., François, S., Deshoux, M., Hartnady, P., Farkas, K., Kraberger, S., Filloux, D., Fernandez, E., Galzi, S., Ferdinand, R., Granier, M., Marais, A., Monge Blasco, P., Candresse, T., Escriu, F., Varsani, A., Harkins, G. W., Martin, D. P., Roumagnac, P. 2016. Molecular characterization and prevalence of two capulaviruses: Alfalfa leaf curl virus from France and Euphorbia caput-medusae latent virus from South Africa. Virology, 493, 142-153. DOI : 10.1016/j.virol.2016.03.016. http://prodinra.inra.fr/record/351207
Cambray, G., Guimaraes, J. C., Mutalik, V. K., Lam, C., Mai, Q. A., Thimmaiah, T., Carothers, J. M., Arkin, A. P., Endy, D., 2016. Measurement and modeling of intrinsic transcription terminators. Nucleic Acids Research, 44, 7006. DOI : 10.1093/nar/gkw379.
François, S., Filloux, D., Roumagnac, P., Bigot, D., Gayral, P., Martin, D., Froissart, R., Ogliastro, M.-H. 2016. Discovery of parvovirus-related sequences in an unexpected broad range of animals. Scientific Reports, 6, 30880. DOI : 10.1038/srep30880. http://prodinra.inra.fr/record/369227
Salasc, F., Mutuel, D., Debaisieux, S., Perrin, A., Dupressoir, T., Gosselin-Grenet, A.-S., Ogliastro, M.-H. 2016. Role of the phosphatidylinositol-3-kinase/Akt/target of rapamycin pathway during ambidensovirus infection of insect cells. Journal of General Virology, 97 (1), 233-245. DOI : 10.1099/jgv.0.000327. http://prodinra.inra.fr/record/351877
2015
Gosselin Grenet, A.-S., Salasc, F., François, S., Mutuel, D., Dupressoir, T., Multeau, C., Perrin, A., Ogliastro, M.-H. 2015. Les densovirus : une « massive attaque » chez les arthropodes. Virologie, 19 (1), 19-31. DOI : 10.1684/vir.2015.0589. http://prodinra.inra.fr/record/326107
Laarif, A., Saleh, D., Clouet, C., Gauthier, N. 2015. Regional co-occurrence between distinct Bemisia tabaci (Hemiptera: Aleyrodidae) species in Tunisia with new insights into the role of host plants. Phytoparasitica, 43, 135-150.
2014
François, S., Bernardo, P., Filloux, D., Roumagnac, P., Yaverkovski, N., Froissart, R., Ogliastro, M.-H. 2014. A novel itera-like densovirus isolated by viral metagenomics from the sea barley Hordeum marinum. Genome Announcements, 2 (6). DOI : 10.1128/genomeA.01196-14 . http://prodinra.inra.fr/record/279467
Gauthier, N., Clouet, C., Perrakis, A., Kapantaidaki, D., Peterschmitt, M., Tsagkarakou, A., 2014. Genetic structure of Bemisia tabaci Med populations from home-range countries, inferred by nuclear and cytoplasmic markers: impact on the distribution of the insecticide resistance genes. Pest Management Science, 70, 1477-1491. DOI : 10.1002/ps.3733.
Guimaraes, J. C., Rocha, M., Arkin, A. P., Cambray, G. 2014. D-Tailor: automated analysis and design of DNA sequences. Bioinformatics, 30, 1087-1094. DOI : 10.1093/bioinformatics/btt742.
Legeai, F., Gimenez, S., Duvic, B., Escoubas, J.-M., Gosselin-Grenet, A.-S., Blanc, F., Cousserans, F., Seninet, I., Bretaudeau, A., Mutel, D., Girard, P.-A., Monsempes, C., Magdelenat, G., Hilliou, F., Feyereisen, R., Ogliastro, M.-H., Volkoff, A.-N., Jacquin-Joly, E., D'Alençon, E., Negre, N., Fournier, P. 2014. Establishment and analysis of a reference transcriptome for Spodoptera frugiperda. BMC Genomics, 15, 704. DOI : 10.1186/1471-2164-15-704. http://prodinra.inra.fr/record/269917
Vayssier Taussat, M., Albina, E., Citti, C., Cosson, J.-F., Jacques, M. A., Lebrun, M.-H., Le Loir, Y., Ogliastro, M.-H., Petit, M.-A., Roumagniac, P., Candresse, T. 2014. Shifting the paradigm from pathogens to pathobiome: new concepts in the light of meta-omics. Frontiers in Cellular and Infection Microbiology, 4, 29. DOI : 10.3389/fcimb.2014.00029. http://prodinra.inra.fr/record/324303
2013
Wang, Y., Castelli, I., Gosselin-Grenet, A.-S., Cermenati, G., Ravallec, M., Fiandra, L., Debaisieux, S., Multeau, C., Lautredou, N., Dupressoir, T., Li, Y., Casartelli, M., Ogliastro, M. 2013. Densovirus crosses the insect midgut by transcytosis and disturbs the barrier epithelial function. Journal of Virology, 87 (22), 12380-12391. DOI : 2013 10.1128/JVI.01396-13.
2012
Multeau, C., Froissart, R., Perrin, A., Castelli, I. Casartelli, M., Ogliastro, M. 2012. Four amino acids on the capsid of the densovirus determine the lepidopteran host midgut recognition. Journal of Virology, 86, 5937-5941. DOI : 2012. 10.1128/JVI.06839-11.
2010
Mutuel, D., Ravallec, M., Chabi, B., Multeau, C., Salmon, J.-M., Fournier, P., Ogliastro, M. 2010. Pathogenesis of Junonia coenia densovirus in Spodoptera frugiperda : A route of infection that leads to hypoxia. Virology, 403, 137-144. DOI : 10.1016/j.virol.2010.04.003.
2009
Vendeville, A., Ravallec, M., Jousset, F. X., Devise, M., Mutuel, D., López-Ferber, M., Fournier, P., Dupressoir, T., Ogliastro, M.. Densovirus infectious pathway requires clathrin-mediated endocytosis followed by trafficking to the nucleus. 2009. Journal of Virology, 83 (9), 4678-89.
Patents
Perrin, A., Cousserans, F., Bergoin, M., Fournier, P., Ogliastro, M. 2010. Vecteurs dérivés de densovirus pour le transfert de gènes chez l’insecte. Brevet n° FR 1004292.
PhD Thesis
Nurul Novelia FUANDILA. 2023. Role of structural variations in the genetic diversity and evolution of the large dsDNA Cyprinid herpesvirus 3. Thèse de doctorat Systèmes intégrés, environnement et biodiversité, Montpellier, France, sous la direction de Jean-Christophe AVARRE et Anne-Sophie GOSSELIN-GRENET.
Laetitia PIGEYRE. 2019. Franchissement de la barrière intestinale du lépidoptère Spodoptera frugiperda par le densovirus JcDV. EPHE : Thèse de doctorat Systèmes intégrés, environnement et biodiversité, Montpellier, France, sous la direction de Anne-Sophie GOSSELIN et Thierry DUPRESSOIR.
Sarah FRANÇOIS. 2017. Diversité et écologie des virus associés aux arthropodes : des communautés aux génomes. Thèse de doctorat de l'Université de Montpellier, Montpellier, France, sous la direction de Mylène OGLIASTRO & Rémy FROISSART. Disponible sur http://www.biu-montpellier.fr/florabium/jsp/nnt.jsp?nnt=2017MONTT106.
Fanny SALASC. 2014. Infection par un parvovirus d'insecte et voie de signalisation cellulaire PI3K/Akt/TOR : rôle dans la multiplication virale. EPHE : Thèse de doctorat Systèmes intégrés, environnement et biodiversité, Montpellier, France, sous la direction de Thierry DUPRESSOIR
Cécilia MULTEAU. 2012. Contribution à l'étude du potentiel d'utilisation des Densovirus en lutte microbiologique. Thèse de doctorat en Virologie de l'Université Montpellier 2, Montpellier, France sous la direction de Mylène OGLIASTRO.
